CKG

class CKG(create_inverse_triples=False, random_state=0, **kwargs)[source]

Bases: pykeen.datasets.base.TabbedDataset

The Clinical Knowledge Graph (CKG) dataset from [santos2020].

This dataset contains ~7.6 million nodes, 11 relations, and ~26 million triples.

santos2020(1,2)

Santos, A., et al (2020). Clinical Knowledge Graph Integrates Proteomics Data into Clinical Decision-Making. bioRxiv, 2020.05.09.084897.

Initialize the CKG dataset from [santos2020].

Parameters

  • create_inverse_triples (bool) – Should inverse triples be created? Defaults to false.

  • random_state (Union[None, str, Generator]) – The random seed to use in splitting the dataset. Defaults to 0.

  • kwargs – keyword arguments passed to pykeen.datasets.base.TabbedDataset.